Contents

Three-dimensional volumetric ImageData datasets.

Section Badge:

3D Volume

Dataset Count:

24

Bolt Nut Dataset

Downloads ImageData MultiBlock 3D Volume Homogeneous

download_bolt_nut()

Download bolt nut dataset.

../../../_images/pyvista-examples-downloads-download_bolt_nut-1_00_00.png

Dataset Info

Data Type

MultiBlock

ImageData

Cell Type

VOXEL

Length

1.54e+02

File Info

File Size

132.8 KB

Num Files

2

File Ext

.slc

Reader

SLCReader

See also Volume Rendering

Data Source

bolt.slc nut.slc

Brain Dataset

Downloads ImageData 3D Volume Medical

download_brain()

Download brain dataset.

../../../_images/pyvista-examples-downloads-download_brain-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

6 998 400

N Points

7 109 137

Length

3.34e+02

Dimensions

181, 217, 181

Spacing

1.0, 1.0, 1.0

N Arrays

1

File Info

File Size

7.1 MB

Num Files

1

File Ext

.vtk

Reader

VTKDataSetReader

See also Brain Atlas With Sides Dataset

Data Source

brain.vtk

Brain Atlas With Sides Dataset

Downloads ImageData 3D Volume Medical

download_brain_atlas_with_sides()

Download an image of an averaged brain with a right-left label.

../../../_images/pyvista-examples-downloads-download_brain_atlas_with_sides-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

874 800

N Points

902 629

Length

3.34e+02

Dimensions

91, 109, 91

Spacing

2.0, 2.0, 2.0

N Arrays

1

File Info

File Size

531.1 KB

Num Files

1

File Ext

.nii.gz

Reader

NIFTIReader

See also Brain Dataset

Data Source

avg152T1_RL_nifti.nii.gz

Carotid Dataset

Downloads ImageData 3D Volume Medical

download_carotid()

Download carotid dataset.

../../../_images/pyvista-examples-downloads-download_carotid-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

158 400

N Points

167 580

Length

9.93e+01

Dimensions

76, 49, 45

Spacing

1.0, 1.0, 1.0

N Arrays

2

File Info

File Size

2.7 MB

Num Files

1

File Ext

.vtk

Reader

VTKDataSetReader

Data Source

carotid.vtk

Channels Dataset

Built-in ImageData 3D Volume

load_channels()

Load a uniform grid of fluvial channels in the subsurface.

../../../_images/pyvista-examples-examples-load_channels-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

6 250 000

N Points

6 363 101

Length

3.67e+02

Dimensions

251, 251, 101

Spacing

1.0, 1.0, 1.0

N Arrays

1

File Info

File Size

522.3 KB

Num Files

1

File Ext

.vti

Reader

XMLImageDataReader

Data Source

channels.vti

Chest Dataset

Downloads ImageData 3D Volume Medical

download_chest()

Download chest dataset.

../../../_images/pyvista-examples-downloads-download_chest-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

4 700 178

N Points

4 980 736

Length

3.39e+02

Dimensions

512, 512, 19

Spacing

4.69e-01, 4.69e-01, 5.00e-01

N Arrays

1

File Info

File Size

6.1 MB

Num Files

1

File Ext

.mha

Reader

MetaImageReader

See also Volume Rendering

Data Source

MetaIO/ChestCT-SHORT.mha

Coil Magnetic Field Dataset

Downloads ImageData 3D Volume

download_coil_magnetic_field()

Download the magnetic field of a coil.

../../../_images/pyvista-examples-downloads-download_coil_magnetic_field-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

512 000

N Points

531 441

Length

1.39e+02

Dimensions

81, 81, 81

Spacing

1.0, 1.0, 1.0

N Arrays

1

File Info

File Size

9.0 MB

Num Files

1

File Ext

.vti

Reader

XMLImageDataReader

See also Plot a Magnetic Field

Data Source

magpylib/coil_field.vti

Damavand Volcano Dataset

Downloads ImageData 3D Volume

download_damavand_volcano()

Download damavand volcano model.

../../../_images/pyvista-examples-downloads-download_damavand_volcano-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

11 003 760

N Points

11 156 040

Length

3.68e+05

Dimensions

280, 233, 171

Spacing

1.00e+03, 1.00e+03, 3.54e+02

N Arrays

1

File Info

File Size

44.6 MB

Num Files

1

File Ext

.vtk

Reader

VTKDataSetReader

See also Volume Rendering

Data Source

damavand-volcano.vtk

Dicom Stack Dataset

Downloads ImageData 3D Volume Medical

download_dicom_stack()

Download TCIA DICOM stack volume.

../../../_images/pyvista-examples-downloads-download_dicom_stack-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

522 242

N Points

786 432

Length

7.06e+02

Dimensions

512, 512, 3

Spacing

9.77e-01, 9.77e-01, 1.20e+01

N Arrays

1

File Info

File Size

1.6 MB

Num Files

3

File Ext

.dcm

Reader

DICOMReader

Data Source

DICOM_Stack/data.zip

Embryo Dataset

Downloads ImageData 3D Volume Medical

download_embryo()

Download a volume of an embryo.

../../../_images/pyvista-examples-downloads-download_embryo-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

16 581 375

N Points

16 777 216

Length

4.42e+02

Dimensions

256, 256, 256

Spacing

1.0, 1.0, 1.0

N Arrays

1

File Info

File Size

3.9 MB

Num Files

1

File Ext

.slc

Reader

SLCReader

Data Source

embryo.slc

Frog Dataset

Downloads ImageData 3D Volume Medical

download_frog()

Download frog dataset.

../../../_images/pyvista-examples-downloads-download_frog-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

31 594 185

N Points

31 960 000

Length

7.14e+02

Dimensions

500, 470, 136

Spacing

1.0, 1.0, 1.5

N Arrays

1

File Info

File Size

5.2 MB

Num Files

2

File Ext

.mhd,

.zraw

Reader

MetaImageReader

See also Frog Tissue Dataset, Volume Rendering

Data Source

froggy/frog.mhd froggy/frog.zraw

Frog Tissue Dataset

Downloads ImageData 3D Volume

download_frog_tissue()

Download frog tissue dataset.

../../../_images/not_available.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

31 594 185

N Points

31 960 000

Length

7.14e+02

Dimensions

500, 470, 136

Spacing

1.0, 1.0, 1.5

N Arrays

1

File Info

File Size

262.4 KB

Num Files

2

File Ext

.mhd,

.zraw

Reader

MetaImageReader

See also Frog Dataset

Data Source

froggy/frogtissue.mhd froggy/frogtissue.zraw

Frog Tissues Dataset

Built-in ImageData 3D Volume Medical

load_frog_tissues()

Load frog tissues dataset.

../../../_images/pyvista-examples-examples-load_frog_tissues-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

31 594 185

N Points

31 960 000

Length

7.14e+02

Dimensions

500, 470, 136

Spacing

1.0, 1.0, 1.5

N Arrays

1

File Info

File Size

380.4 KB

Num Files

1

File Ext

.vti

Reader

XMLImageDataReader

See also Frog Dataset

Data Source

frog_tissues.vti

Full Head Dataset

Downloads ImageData 3D Volume

download_full_head()

Download the full head image.

../../../_images/pyvista-examples-downloads-download_full_head-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

6 047 325

N Points

6 160 384

Length

3.66e+02

Dimensions

256, 256, 94

Spacing

9.38e-01, 9.38e-01, 1.50e+00

N Arrays

1

File Info

File Size

6.6 MB

Num Files

2

File Ext

.mhd,

.raw.gz

Reader

MetaImageReader

Data Source

FullHead.mhd FullHead.raw.gz

Head Dataset

Downloads ImageData 3D Volume Medical

download_head()

Download head dataset.

../../../_images/pyvista-examples-downloads-download_head-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

117 547

N Points

124 992

Length

3.49e+02

Dimensions

48, 62, 42

Spacing

4.0, 4.0, 4.0

N Arrays

1

File Info

File Size

125.2 KB

Num Files

2

File Ext

.mhd,

.raw

Reader

MetaImageReader

See also Head 2 Dataset, Volume Rendering

Data Source

HeadMRVolume.mhd HeadMRVolume.raw

Head 2 Dataset

Downloads ImageData 3D Volume Medical

download_head_2()

Download head dataset.

../../../_images/pyvista-examples-downloads-download_head_2-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

6 047 325

N Points

6 160 384

Length

4.06e+02

Dimensions

256, 256, 94

Spacing

1.0, 1.0, 2.0

N Arrays

1

File Info

File Size

8.8 MB

Num Files

1

File Ext

.vti

Reader

XMLImageDataReader

See also Head Dataset

Data Source

head.vti

Headsq Dataset

Downloads ImageData 3D Volume

download_headsq()

Download the headsq dataset.

../../../_images/pyvista-examples-downloads-download_headsq-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

365 148

N Points

380 928

Length

3.17e+02

Dimensions

64, 64, 93

Spacing

3.2, 3.2, 1.5

N Arrays

1

File Info

File Size

762.0 KB

Num Files

94

File Ext

.1,

.10,

.11,

…,

.92,

.93,

.nhdr

Reader

NRRDReader

Data Source

headsq/quarter.nhdr headsq/quarter.1 headsq/quarter.2 headsq/quarter.3 headsq/quarter.4 headsq/quarter.5 headsq/quarter.6 headsq/quarter.7 headsq/quarter.8 headsq/quarter.9 headsq/quarter.10 headsq/quarter.11 headsq/quarter.12 headsq/quarter.13 headsq/quarter.14 headsq/quarter.15 headsq/quarter.16 headsq/quarter.17 headsq/quarter.18 headsq/quarter.19 headsq/quarter.20 headsq/quarter.21 headsq/quarter.22 headsq/quarter.23 headsq/quarter.24 headsq/quarter.25 headsq/quarter.26 headsq/quarter.27 headsq/quarter.28 headsq/quarter.29 headsq/quarter.30 headsq/quarter.31 headsq/quarter.32 headsq/quarter.33 headsq/quarter.34 headsq/quarter.35 headsq/quarter.36 headsq/quarter.37 headsq/quarter.38 headsq/quarter.39 headsq/quarter.40 headsq/quarter.41 headsq/quarter.42 headsq/quarter.43 headsq/quarter.44 headsq/quarter.45 headsq/quarter.46 headsq/quarter.47 headsq/quarter.48 headsq/quarter.49 headsq/quarter.50 headsq/quarter.51 headsq/quarter.52 headsq/quarter.53 headsq/quarter.54 headsq/quarter.55 headsq/quarter.56 headsq/quarter.57 headsq/quarter.58 headsq/quarter.59 headsq/quarter.60 headsq/quarter.61 headsq/quarter.62 headsq/quarter.63 headsq/quarter.64 headsq/quarter.65 headsq/quarter.66 headsq/quarter.67 headsq/quarter.68 headsq/quarter.69 headsq/quarter.70 headsq/quarter.71 headsq/quarter.72 headsq/quarter.73 headsq/quarter.74 headsq/quarter.75 headsq/quarter.76 headsq/quarter.77 headsq/quarter.78 headsq/quarter.79 headsq/quarter.80 headsq/quarter.81 headsq/quarter.82 headsq/quarter.83 headsq/quarter.84 headsq/quarter.85 headsq/quarter.86 headsq/quarter.87 headsq/quarter.88 headsq/quarter.89 headsq/quarter.90 headsq/quarter.91 headsq/quarter.92 headsq/quarter.93

Hydrogen Orbital Dataset

Built-in ImageData 3D Volume

load_hydrogen_orbital()

Load the hydrogen wave function for a pyvista.ImageData.

../../../_images/pyvista-examples-examples-load_hydrogen_orbital-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

970 299

N Points

1 000 000

Length

8.66e+00

Dimensions

100, 100, 100

Spacing

5.05e-02, 5.05e-02, 5.05e-02

N Arrays

2

File Info

Reader

None

Iron Protein Dataset

Downloads ImageData 3D Volume

download_iron_protein()

Download iron protein dataset.

../../../_images/pyvista-examples-downloads-download_iron_protein-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

300 763

N Points

314 432

Length

1.16e+02

Dimensions

68, 68, 68

Spacing

1.0, 1.0, 1.0

N Arrays

1

File Info

File Size

314.6 KB

Num Files

1

File Ext

.vtk

Reader

VTKDataSetReader

Data Source

ironProt.vtk

Knee Full Dataset

Downloads ImageData 3D Volume Medical

download_knee_full()

Download full knee dataset.

../../../_images/pyvista-examples-downloads-download_knee_full-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

10 225 800

N Points

10 368 384

Length

3.07e+02

Dimensions

208, 248, 201

Spacing

7.23e-01, 7.23e-01, 1.00e+00

N Arrays

1

File Info

File Size

9.0 MB

Num Files

1

File Ext

.slc

Reader

SLCReader

See also Knee Dataset

Data Source

vw_knee.slc

M4 Total Density Dataset

Downloads ImageData 3D Volume

download_m4_total_density()

Download a total density dataset of the chemistry.

../../../_images/pyvista-examples-downloads-download_m4_total_density-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

15 120

N Points

17 050

Length

4.38e+01

Dimensions

25, 22, 31

Spacing

1.0, 1.0, 1.0

N Arrays

1

File Info

File Size

225.7 KB

Num Files

1

File Ext

.cube

Reader

GaussianCubeReader

Data Source

m4_TotalDensity.cube

Uniform Dataset

Built-in ImageData 3D Volume

load_uniform()

Load a sample uniform grid.

../../../_images/pyvista-examples-examples-load_uniform-1_00_00.png

Dataset Info

Data Type

ImageData

Cell Type

VOXEL

N Cells

729

N Points

1 000

Length

1.56e+01

Dimensions

10, 10, 10

Spacing

1.0, 1.0, 1.0

N Arrays

2

File Info

File Size

14.1 KB

Num Files

1

File Ext

.vtk

Reader

VTKDataSetReader

Data Source

uniform.vtk

Whole Body Ct Female Dataset

Downloads ImageData MultiBlock 3D Volume Homogeneous Medical

download_whole_body_ct_female()

Download a CT image of a female subject with 117 segmented anatomic structures.

../../../_images/pyvista-examples-downloads-download_whole_body_ct_female-1_00_00.png

Dataset Info

Data Type

MultiBlock

ImageData

Cell Type

VOXEL

Length

1.06e+03

File Info

File Size

17.7 KB

Num Files

2

File Ext

.py,

.vtm

Reader

XMLMultiBlockDataReader

See also Visualize Anatomical Groups, Whole Body Ct Male Dataset, Volume With Segmentation Mask

Data Source

whole_body_ct/s1380_resampled.zip whole_body_ct/colors.py

Whole Body Ct Male Dataset

Downloads ImageData MultiBlock 3D Volume Homogeneous Medical

download_whole_body_ct_male()

Download a CT image of a male subject with 117 segmented anatomic structures.

../../../_images/pyvista-examples-downloads-download_whole_body_ct_male-1_00_00.png

Dataset Info

Data Type

MultiBlock

ImageData

Cell Type

VOXEL

Length

1.06e+03

File Info

File Size

17.7 KB

Num Files

2

File Ext

.py,

.vtm

Reader

XMLMultiBlockDataReader

See also Visualize Anatomical Groups, Whole Body Ct Female Dataset, Volume With Segmentation Mask

Data Source

whole_body_ct/s1397_resampled.zip whole_body_ct/colors.py

Contents